AMMRL: ENC 2008
Josh Kurutz (jkurutz@uchicago.edu)
Mon, 28 Jan 2008 15:44:06 -0600
Hi all,
I'd like to refresh your radar by reminding you of our meeting at ENC
this March. The theme for our session is "Bottlenecks and Pitfalls in
NMR Practice - Working Toward Collective Solutions." The focus will
be on identifying common problems we face and crafting solutions for
them.
Two notions have struck resonance already:
1) Pulse sequences. To address the problem of tracking down working
pulse sequence code, we'll discuss a proposal to request that journal
editors require authors to include pulse sequence code as
supplementary material when publishing new experiments.
2) Wikis. These are useful tools for sharing information in a
community such as ours, but to be successful, they require a good
combination of participation, usefulness, breadth, and ... other
things we should discover as a group. We'll spend some time
discussing what will help NMR wiki(s) work effectively for us.
I'm seeking people who would like to lead discussions of other
topics. Some of of the ideas that have been mentioned include:
3) Software installation and use. Much NMR software is powerful, but
can be so practically difficult that it does not get used. Perhaps we
should discuss our common facilities' needs and draft a set of
guidelines for software developers that will ensure their labor will
bear fruit outside their own laboratories.
4) User guides. Managers of many facilities write guides for how to
use NMR hardware and software, but much of this work is redundant and
arguably should have been more extensively developed by manufacturers
and programmers. What can be done to coordinate our efforts and
improve primary documentation?
5) The sample bottleneck. Oftentimes researchers get good preliminary
NMR data, but then have so much trouble coming up with a useful
sample that they give up and move on to other pursuits. (E.g., can
get enough labeled protein.) Can we pool collective practical
knowledge of how to produce good NMR samples, thus providing a
resource for erstwhile users and limiting their pain? Should broker
connections between investigators?
6) The training bottleneck. How much training to researchers need to
pursue NMR? Should NMR facilities encourage drop-off data collection
service for routine experiments and train researchers only in data
processing? Is this cost-effective? Is it desirable?
7) Equipment reviews. Working so closely with NMR hardware and being
responsible for maintaining it, we are in prime position to share our
opinions of different vendors and their products. We already discuss
these things offline and over AMMRL email, so how about taking the
next step?
Please let me know if you would like to lead a discussion and if
there is an issue you would like to see brought up at the meeting. I
am especially interested in hearing from colleagues in industry and
those in solids NMR, whose concerns I am less familiar with and from
whom I haven't heard much yet.
Thanks for your attention.
- Josh
Josh Kurutz, Ph.D.
Technical Director, Biomolecular NMR Facility
University of Chicago
Gordon Center for Integrative Science, room W123C
929 E. 57th St.
Chicago, IL 60637
Office: (773) 834-9805
Spectrometer Room: (773) 702-4052
Cell: (773) 315-5732
Fax: (208) 978-2599
nmr.bsd.uchicago.edu
homepage.mac.com/jkurutz